Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP86965.1 | SIP96932.1 | SAMN05421829_10175 | SAMN05421829_101507 | Glutamate synthase (NADH) large subunit. | benzoate-CoA ligase. | 0.518 |
SIP86965.1 | SIP96987.1 | SAMN05421829_10175 | SAMN05421829_101509 | Glutamate synthase (NADH) large subunit. | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | 0.866 |
SIP86965.1 | SIP97106.1 | SAMN05421829_10175 | SAMN05421829_101513 | Glutamate synthase (NADH) large subunit. | benzoyl-CoA oxygenase, component A. | 0.964 |
SIP86965.1 | SIR30086.1 | SAMN05421829_10175 | SAMN05421829_112139 | Glutamate synthase (NADH) large subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.803 |
SIP96932.1 | SIP86965.1 | SAMN05421829_101507 | SAMN05421829_10175 | benzoate-CoA ligase. | Glutamate synthase (NADH) large subunit. | 0.518 |
SIP96932.1 | SIP96987.1 | SAMN05421829_101507 | SAMN05421829_101509 | benzoate-CoA ligase. | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | 0.750 |
SIP96932.1 | SIP97042.1 | SAMN05421829_101507 | SAMN05421829_101511 | benzoate-CoA ligase. | 2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme. | 0.882 |
SIP96932.1 | SIP97106.1 | SAMN05421829_101507 | SAMN05421829_101513 | benzoate-CoA ligase. | benzoyl-CoA oxygenase, component A. | 0.810 |
SIP96932.1 | SIR30086.1 | SAMN05421829_101507 | SAMN05421829_112139 | benzoate-CoA ligase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.474 |
SIP96987.1 | SIP86965.1 | SAMN05421829_101509 | SAMN05421829_10175 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.866 |
SIP96987.1 | SIP96932.1 | SAMN05421829_101509 | SAMN05421829_101507 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | benzoate-CoA ligase. | 0.750 |
SIP96987.1 | SIP97042.1 | SAMN05421829_101509 | SAMN05421829_101511 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | 2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme. | 0.974 |
SIP96987.1 | SIP97106.1 | SAMN05421829_101509 | SAMN05421829_101513 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | benzoyl-CoA oxygenase, component A. | 0.788 |
SIP96987.1 | SIR29943.1 | SAMN05421829_101509 | SAMN05421829_112133 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | acyl-CoA thioesterase. | 0.803 |
SIP96987.1 | SIR29991.1 | SAMN05421829_101509 | SAMN05421829_112135 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.774 |
SIP96987.1 | SIR30012.1 | SAMN05421829_101509 | SAMN05421829_112136 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.788 |
SIP96987.1 | SIR30032.1 | SAMN05421829_101509 | SAMN05421829_112137 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.776 |
SIP96987.1 | SIR30061.1 | SAMN05421829_101509 | SAMN05421829_112138 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.773 |
SIP96987.1 | SIR30086.1 | SAMN05421829_101509 | SAMN05421829_112139 | 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.853 |
SIP97042.1 | SIP96932.1 | SAMN05421829_101511 | SAMN05421829_101507 | 2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme. | benzoate-CoA ligase. | 0.882 |
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