STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP86718.1Decaheme c-type cytochrome, DmsE family. (315 aa)    
Predicted Functional Partners:
SIR46882.1
Decaheme-associated outer membrane protein, MtrB/PioB family.
 
 
 0.905
SIQ61550.1
Decaheme-associated outer membrane protein, MtrB/PioB family.
 
 
 0.894
SIR65051.1
Doubled CXXCH domain-containing protein.
 
 0.837
SIP86708.1
Decaheme-associated outer membrane protein, MtrB/PioB family.
       0.754
SIR26914.1
Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.747
SIR26852.1
Periplasmic nitrate reductase subunit NapG.
 
 
 0.735
SIR37682.1
phenylacetyl-CoA:acceptor oxidoreductase PadB subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.732
SIR32787.1
Cytochrome b subunit of formate dehydrogenase.
 
 
 0.702
SIR12813.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.692
SIR46899.1
Cytochrome b subunit of formate dehydrogenase.
 
 
 0.690
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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