STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ27055.1Polyhydroxyalkanoate synthesis repressor PhaR. (209 aa)    
Predicted Functional Partners:
SIQ27133.1
Polyhydroxyalkanoate synthase.
 
   
 0.849
SIQ28204.1
Polyhydroxyalkanoate synthase.
 
   
 0.803
SIR32236.1
Polyhydroxyalkanoate synthase.
 
   
 0.776
SIQ53364.1
Phasin family protein.
 
   
 0.747
SIR54628.1
Phasin family protein.
 
   
 0.717
SIQ48357.1
Phasin family protein.
 
   
 0.713
rimO
SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.676
SIQ27104.1
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.674
SIQ14771.1
Phasin family protein.
 
   
 0.649
SIQ27079.1
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.642
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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