STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ42940.1Two-component system, OmpR family, sensor histidine kinase TctE. (493 aa)    
Predicted Functional Partners:
SIQ42971.1
Two-component system, OmpR family, response regulator/two-component system, OmpR family, response regulator TctD.
 0.993
SIQ08164.1
PAS domain S-box-containing protein.
 
0.978
SIR48822.1
PAS domain S-box-containing protein.
 
0.978
SIR04142.1
PAS domain S-box-containing protein.
 
0.977
SIR48786.1
Response regulator receiver domain-containing protein.
  
 0.977
SIQ87337.1
Two-component system, OmpR family, response regulator TctD.
 0.963
SIP94816.1
Signal transduction histidine kinase.
0.962
SIR57340.1
PAS domain S-box-containing protein.
 
 0.958
SIQ11726.1
PAS domain S-box-containing protein.
 
0.957
SIR48736.1
PAS domain S-box-containing protein.
 
0.955
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.