STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ38778.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.829
nudJ
ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. NudJ subfamily.
       0.810
SIQ71671.1
C4-dicarboxylate transporter, DctQ subunit.
  
     0.579
SIQ38828.1
Sodium/proton antiporter, NhaD family.
 
     0.576
SIR21665.1
Carbohydrate-selective porin, OprB family.
  
     0.551
SIR35500.1
Protein of unknown function.
  
     0.518
SIR47057.1
Hypothetical protein.
  
     0.503
SIQ38880.1
Uncharacterized conserved protein, contains Zn-finger domain.
 
     0.500
SIQ31975.1
Protein of unknown function.
  
     0.482
SIQ63248.1
Phasin family protein.
  
     0.481
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.