STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ39253.1Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (360 aa)    
Predicted Functional Partners:
SIQ39322.1
TRAP transporter, DctM subunit.
 
 
 0.937
SIQ39297.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
 0.934
SIQ43642.1
TRAP transporter, DctM subunit.
 
 
 0.756
SIQ39270.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 
0.655
SIP96428.1
TRAP transporter, DctM subunit.
  
 
 0.606
SIQ71671.1
C4-dicarboxylate transporter, DctQ subunit.
  
 
 0.566
SIQ60038.1
TRAP transporter, DctM subunit.
  
 
 0.556
SIQ71701.1
C4-dicarboxylate transporter, DctM subunit.
  
 
 0.545
SIR57270.1
TRAP transporter, DctM subunit.
  
 
 0.516
SIQ39229.1
Microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62.
       0.508
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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