STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ60205.1Outer membrane protein (porin). (378 aa)    
Predicted Functional Partners:
SIQ48055.1
Phospholipid-binding lipoprotein MlaA.
   
 
 0.818
SIQ87266.1
Outer membrane protein (porin).
  
  
 
0.669
SIR41584.1
Outer membrane protein (porin).
  
  
 
0.666
SIQ73549.1
Outer membrane protein (porin).
  
  
 
0.658
SIQ73576.1
Outer membrane protein (porin).
  
  
 
0.635
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.573
SIQ11691.1
Sucrose porin.
     
 0.572
SIR21665.1
Carbohydrate-selective porin, OprB family.
     
 0.568
SIR34628.1
Vitamin B12 transporter.
    
 
 0.550
SIR28978.1
Outer membrane protein (porin).
     
  0.540
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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