STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ61328.1Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family. (349 aa)    
Predicted Functional Partners:
SIQ61370.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
   0.934
SIQ61394.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.893
SIQ61350.1
Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family.
 
    0.890
SIQ61674.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
   
 0.801
SIQ61795.1
Uncharacterized membrane protein.
 
   
 0.800
SIQ61642.1
Predicted exporter.
 
     0.799
SIQ61765.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 
 0.799
SIQ61443.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
 
     0.798
SIQ61467.1
Beta-ketoacyl synthase, N-terminal domain.
 
     0.789
SIQ61710.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.771
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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