Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ53823.1 | SIQ53857.1 | SAMN05421829_10526 | SAMN05421829_10527 | Type VI secretion system secreted protein VgrG. | Hypothetical protein. | 0.772 |
SIQ53823.1 | SIQ53891.1 | SAMN05421829_10526 | SAMN05421829_10528 | Type VI secretion system secreted protein VgrG. | Hypothetical protein. | 0.774 |
SIQ53823.1 | SIQ53930.1 | SAMN05421829_10526 | SAMN05421829_10529 | Type VI secretion system secreted protein VgrG. | Hypothetical protein. | 0.493 |
SIQ53857.1 | SIQ53823.1 | SAMN05421829_10527 | SAMN05421829_10526 | Hypothetical protein. | Type VI secretion system secreted protein VgrG. | 0.772 |
SIQ53857.1 | SIQ53891.1 | SAMN05421829_10527 | SAMN05421829_10528 | Hypothetical protein. | Hypothetical protein. | 0.976 |
SIQ53857.1 | SIQ53930.1 | SAMN05421829_10527 | SAMN05421829_10529 | Hypothetical protein. | Hypothetical protein. | 0.942 |
SIQ53857.1 | SIR17099.1 | SAMN05421829_10527 | SAMN05421829_110183 | Hypothetical protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.793 |
SIQ53857.1 | SIR25983.1 | SAMN05421829_10527 | SAMN05421829_1123 | Hypothetical protein. | Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase. | 0.555 |
SIQ53857.1 | psd | SAMN05421829_10527 | SAMN05421829_103325 | Hypothetical protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.550 |
SIQ53857.1 | rplC | SAMN05421829_10527 | SAMN05421829_1113 | Hypothetical protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.536 |
SIQ53857.1 | rplD | SAMN05421829_10527 | SAMN05421829_1114 | Hypothetical protein. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.541 |
SIQ53857.1 | rplL | SAMN05421829_10527 | SAMN05421829_1288 | Hypothetical protein. | LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.535 |
SIQ53857.1 | rpmA | SAMN05421829_10527 | SAMN05421829_10842 | Hypothetical protein. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.540 |
SIQ53891.1 | SIQ53823.1 | SAMN05421829_10528 | SAMN05421829_10526 | Hypothetical protein. | Type VI secretion system secreted protein VgrG. | 0.774 |
SIQ53891.1 | SIQ53857.1 | SAMN05421829_10528 | SAMN05421829_10527 | Hypothetical protein. | Hypothetical protein. | 0.976 |
SIQ53891.1 | SIQ53930.1 | SAMN05421829_10528 | SAMN05421829_10529 | Hypothetical protein. | Hypothetical protein. | 0.445 |
SIQ53930.1 | SIQ53823.1 | SAMN05421829_10529 | SAMN05421829_10526 | Hypothetical protein. | Type VI secretion system secreted protein VgrG. | 0.493 |
SIQ53930.1 | SIQ53857.1 | SAMN05421829_10529 | SAMN05421829_10527 | Hypothetical protein. | Hypothetical protein. | 0.942 |
SIQ53930.1 | SIQ53891.1 | SAMN05421829_10529 | SAMN05421829_10528 | Hypothetical protein. | Hypothetical protein. | 0.445 |
SIR17099.1 | SIQ53857.1 | SAMN05421829_110183 | SAMN05421829_10527 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Hypothetical protein. | 0.793 |
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