STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ68276.1Two-component system, NarL family, sensor histidine kinase UhpB. (476 aa)    
Predicted Functional Partners:
SIQ68301.1
Two component transcriptional regulator, LuxR family.
 
 0.978
SIQ07989.1
Two component transcriptional regulator, LuxR family.
 
 0.909
SIQ43136.1
Two component transcriptional regulator, LuxR family.
 
 0.909
SIR42466.1
Two component transcriptional regulator, LuxR family.
 
 0.909
SIR64622.1
Two component transcriptional regulator, LuxR family.
 
 0.909
SIR15519.1
Two component transcriptional regulator, LuxR family.
 
 0.908
SIR45320.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.908
SIR46837.1
Two component transcriptional regulator, LuxR family.
 
 0.908
SIR04636.1
Two component transcriptional regulator, LuxR family.
 
 0.907
SIR49804.1
Two component transcriptional regulator, LuxR family.
 
 0.907
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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