STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ76506.1Transcriptional regulator, AsnC family. (353 aa)    
Predicted Functional Partners:
SIQ76448.1
Cytochrome c55X.
 
  
 0.984
SIQ76651.1
Cytochrome c, mono-and diheme variants.
 
  
 0.984
SIQ76480.1
Protein NirF.
 
  
 0.978
SIQ76623.1
Heme d1 biosynthesis radical SAM protein NirJ.
 
 0.978
SIQ76533.1
Transcriptional regulator, AsnC family.
 
 
0.972
SIQ76590.1
Transcriptional regulator, AsnC family.
 
   
0.921
SIQ76379.1
Dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein.
 
  
 0.892
pqqE
Pyrroloquinoline quinone biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
  
 
 0.760
SIQ76419.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.750
SIQ10900.1
Nitric oxide reductase, NorB subunit apoprotein; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.696
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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