STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ92232.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
SIQ92287.1
General secretion pathway protein D.
  
 
 0.924
SIP87055.1
Type IV pilus assembly protein PilN.
  
 
 0.923
SIP87035.1
Type IV pilus assembly protein PilP.
  
 
 0.868
SIQ92320.1
General secretion pathway protein G.
  
  
 0.815
SIQ92354.1
Type II secretion system protein G (GspG).
  
  
 0.803
SIQ92387.1
Type II secretory pathway, pseudopilin PulG.
  
  
 0.803
SIQ92261.1
Hypothetical protein.
       0.787
SIQ92106.1
Type II secretion system protein F (GspF).
   
 
 0.770
SIQ92137.1
General secretion pathway protein E.
  
 
 0.762
SIP87024.1
Type IV pilus assembly protein PilQ.
  
 
 0.678
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.