STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR06174.1Hypothetical protein. (444 aa)    
Predicted Functional Partners:
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.787
SIR55912.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
 
 0.654
SIQ76651.1
Cytochrome c, mono-and diheme variants.
  
 
 0.645
SIP95823.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
  0.622
SIQ24755.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
   
 
  0.622
SIQ23933.1
Quinohemoprotein amine dehydrogenase, beta subunit.
  
 
 0.550
SIQ68213.1
PQQ-dependent catabolism-associated beta-propeller protein.
  
 
 0.550
SIQ76480.1
Protein NirF.
  
 
 0.550
SIR14339.1
PQQ-dependent catabolism-associated beta-propeller protein.
  
 
 0.550
SIR27867.1
6-bladed beta-propeller protein.
  
 
 0.550
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.