STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR07236.1Cellobiose phosphorylase. (2930 aa)    
Predicted Functional Partners:
nagZ
beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.874
SIP88076.1
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.870
SIQ61604.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.867
SIQ73833.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
  
 
 0.867
SIQ74506.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.867
SIQ41229.1
Lysophospholipase L1.
    
 0.858
SIQ12636.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
    
 0.849
SIR29606.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.835
SIR52335.1
UDP-glucose pyrophosphorylase.
  
 
 0.829
SIR14952.1
TolB amino-terminal domain-containing protein.
  
 0.815
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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