STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR08886.1Protein of unknown function. (573 aa)    
Predicted Functional Partners:
SIR08856.1
Protein of unknown function.
 
  
 0.965
SIR08827.1
Uncharacterized protein.
 
    0.899
SIQ10032.1
Protein of unknown function.
 
  
 0.892
SIR58960.1
Protein of unknown function.
 
  
 0.892
SIQ24230.1
Protein of unknown function.
 
    0.884
SIR08798.1
Hypothetical protein.
 
    0.871
SIQ10012.1
Uncharacterized protein.
 
    0.827
SIR58975.1
Uncharacterized protein.
 
    0.827
SIQ24125.1
Uncharacterized protein.
 
    0.826
SIQ03427.1
Uncharacterized protein.
 
    0.815
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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