STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR16002.1cyclohexanecarboxylate-CoA ligase. (552 aa)    
Predicted Functional Partners:
SIP95823.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 
 0.869
SIQ24755.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
    
 
 0.869
SIQ60400.1
cyclohexanecarboxyl-CoA dehydrogenase.
 
 0.852
SIR17099.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
0.807
SIQ09528.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.790
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.757
SIP87537.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.751
SIP87590.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.751
SIQ04466.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.751
SIR59686.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.751
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.