STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR21665.1Carbohydrate-selective porin, OprB family. (503 aa)    
Predicted Functional Partners:
SIR21693.1
Hypothetical protein.
 
     0.856
SIR35500.1
Protein of unknown function.
  
     0.747
SIR32767.1
Ethylbenzene dehydrogenase.
  
     0.732
SIR21643.1
Cupredoxin-like domain-containing protein.
 
     0.722
SIR09038.1
Uncharacterized protein.
  
     0.714
SIR37682.1
phenylacetyl-CoA:acceptor oxidoreductase PadB subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.707
SIR21594.1
4Fe-4S binding domain-containing protein.
 
     0.706
SIQ58160.1
Hypothetical protein.
  
     0.697
SIQ21062.1
PAS domain S-box-containing protein.
  
   
 0.683
SIR58778.1
Cytochrome c.
  
     0.674
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.