Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIP94816.1 | SIQ08164.1 | SAMN05421829_101428 | SAMN05421829_102211 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIP94816.1 | SIQ11726.1 | SAMN05421829_101428 | SAMN05421829_102350 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIP94816.1 | SIQ46389.1 | SAMN05421829_101428 | SAMN05421829_104269 | Signal transduction histidine kinase. | Two-component system, unclassified family, sensor histidine kinase and response regulator. | 0.999 |
SIP94816.1 | SIQ70916.1 | SAMN05421829_101428 | SAMN05421829_10695 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIP94816.1 | SIQ81789.1 | SAMN05421829_101428 | SAMN05421829_10734 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIP94816.1 | SIR04142.1 | SAMN05421829_101428 | SAMN05421829_10964 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIP94816.1 | SIR29336.1 | SAMN05421829_101428 | SAMN05421829_112111 | Signal transduction histidine kinase. | Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains. | 0.957 |
SIP94816.1 | SIR48736.1 | SAMN05421829_101428 | SAMN05421829_11728 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIP94816.1 | SIR48786.1 | SAMN05421829_101428 | SAMN05421829_11731 | Signal transduction histidine kinase. | Response regulator receiver domain-containing protein. | 0.999 |
SIP94816.1 | SIR48822.1 | SAMN05421829_101428 | SAMN05421829_11733 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SIQ08164.1 | SIP94816.1 | SAMN05421829_102211 | SAMN05421829_101428 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SIQ08164.1 | SIQ11726.1 | SAMN05421829_102211 | SAMN05421829_102350 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SIQ08164.1 | SIQ46389.1 | SAMN05421829_102211 | SAMN05421829_104269 | PAS domain S-box-containing protein. | Two-component system, unclassified family, sensor histidine kinase and response regulator. | 0.999 |
SIQ08164.1 | SIQ70916.1 | SAMN05421829_102211 | SAMN05421829_10695 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SIQ08164.1 | SIQ81789.1 | SAMN05421829_102211 | SAMN05421829_10734 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SIQ08164.1 | SIR04142.1 | SAMN05421829_102211 | SAMN05421829_10964 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SIQ08164.1 | SIR29336.1 | SAMN05421829_102211 | SAMN05421829_112111 | PAS domain S-box-containing protein. | Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains. | 0.933 |
SIQ08164.1 | SIR48736.1 | SAMN05421829_102211 | SAMN05421829_11728 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SIQ08164.1 | SIR48786.1 | SAMN05421829_102211 | SAMN05421829_11731 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SIQ08164.1 | SIR48822.1 | SAMN05421829_102211 | SAMN05421829_11733 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.998 |
page 1 of 6