STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR33805.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
SIR33834.1
Uncharacterized membrane protein.
 
     0.945
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
       0.800
rsfS
Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.799
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.799
SIQ77217.1
Beta-barrel assembly machine subunit BamC.
  
     0.739
SIR33880.1
Protein of unknown function.
 
     0.731
SIQ75430.1
Uncharacterized protein involved in cysteine biosynthesis.
  
     0.723
SIQ38177.1
CNP1-like family protein.
  
     0.720
SIQ57522.1
Protein of unknown function.
  
     0.717
SIQ87266.1
Outer membrane protein (porin).
  
     0.683
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.