STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR37547.12-oxoglutarate ferredoxin oxidoreductase subunit beta. (279 aa)    
Predicted Functional Partners:
SIQ13826.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.999
SIR37530.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.999
SIR59732.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.999
SIQ94656.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.936
sucD
succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
 
 0.910
SIQ98270.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.910
SIR35172.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.910
sucC
succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
 
 0.908
SIR37800.1
Pyruvate ferredoxin oxidoreductase alpha subunit/phenylglyoxylate dehydrogenase alpha subunit.
 
 0.906
SIQ72445.1
Indolepyruvate ferredoxin oxidoreductase.
  
 0.902
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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