STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR41631.1trans-feruloyl-CoA synthase. (622 aa)    
Predicted Functional Partners:
SIR41652.1
Vanillin synthase /trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.931
SIP95823.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 
 0.869
SIQ24755.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
    
 
 0.869
SIP97042.1
2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme.
 
 0.839
SIR41608.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
   
 0.811
SIR17099.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 0.789
SIR59686.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.784
SIR41679.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.765
SIP97075.1
benzoyl-CoA oxygenase, component B.
  
  
  0.759
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.757
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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