STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR46120.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
SIR46143.1
Probable nitrogen fixation protein.
 
  
 0.946
SIR46165.1
Nitrogen fixation protein NifX.
 
  
 0.944
SIR46082.1
Ferredoxin III, nif-specific.
 
    0.942
SIR46187.1
Nitrogenase molybdenum-iron protein NifN; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.844
SIR46531.1
LRV protein FeS4 cluster.
 
    0.825
nifW-2
Nitrogenase-stabilizing/protective protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.798
SIQ46547.1
Probable nitrogen fixation protein.
 
  
 0.790
SIR46055.1
Ferredoxin, 2Fe-2S.
 
    0.789
SIR46444.1
Nitrogen fixation protein NifT.
 
  
 0.785
SIR46212.1
Nitrogenase molybdenum-cofactor synthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.784
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.