STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR46517.1Nitrogen fixation protein NifZ. (114 aa)    
Predicted Functional Partners:
SIR46444.1
Nitrogen fixation protein NifT.
 
  
 0.932
SIR46531.1
LRV protein FeS4 cluster.
 
    0.931
SIR46577.1
Nitrogen fixation protein NifB.
 
  
 0.931
SIR46497.1
Nitrogen fixation protein NifZ.
 
   
 0.929
SIR46388.1
SIR2-like domain-containing protein.
 
    0.914
SIR46427.1
Hypothetical protein.
 
    0.874
SIQ45856.1
Nitrogen fixation protein NifT.
  
 0.873
SIQ46547.1
Probable nitrogen fixation protein.
 
    0.839
SIR46143.1
Probable nitrogen fixation protein.
 
    0.839
SIQ46493.1
Nitrogen fixation protein NifX.
 
  
 0.824
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.