STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR49172.1Nucleotide-binding universal stress protein, UspA family. (145 aa)    
Predicted Functional Partners:
SIR49193.1
Integral membrane protein, YjbE family.
 
     0.827
SIQ87606.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.745
SIQ57196.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.724
SIR58789.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.722
SIQ60170.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.714
SIQ28256.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.703
SIR08771.1
Hemerythrin-like domain-containing protein.
  
     0.668
SIR49149.1
Bacterioferritin; Belongs to the Dps family.
     
 0.537
SIR49214.1
Transcriptional regulator, GntR family.
  
    0.525
SIQ93861.1
SpoIIAA-like.
  
    0.481
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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