STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR48300.1O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. (172 aa)    
Predicted Functional Partners:
SIQ27551.1
Recombination protein MgsA.
      0.914
SIQ45899.1
ADP-ribosyl-[dinitrogen reductase] hydrolase.
    
 0.896
SIQ27354.1
NAD-dependent protein deacetylase, SIR2 family.
 
 0.742
SIR03165.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.553
SIQ94504.1
Sulfide dehydrogenase (flavocytochrome c), flavoprotein subunit.
  
 0.529
SIQ77156.1
Acetoin utilization deacetylase AcuC.
    
  0.479
SIR38229.1
Acetoin utilization deacetylase AcuC.
    
  0.479
SIR48319.1
Hypothetical protein.
       0.469
SIR48345.1
Cytochrome b.
       0.429
SIQ26154.1
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.427
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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