STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR50089.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)    
Predicted Functional Partners:
SIP86965.1
Glutamate synthase (NADH) large subunit.
  
 
  0.828
SIR59325.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 0.812
SIR59299.1
3-hydroxybutyrate dehydrogenase/3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.798
SIR65998.1
3-oxoacyl-[acyl-carrier protein] reductase/2-[hydroxy(phenyl)methyl]-succinyl-CoA dehydrogenase BbsC subunit.
  
 0.777
SIQ09074.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 0.745
SIR50071.1
Thiol:disulfide interchange protein DsbA.
       0.651
SIR50107.1
Glutamate dehydrogenase (NAD).
    
  0.651
SIR17099.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 
 0.641
SIP89239.1
Pteridine reductase.
  
 0.567
argS
arginyl-tRNA synthetase.
       0.556
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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