STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR54628.1Phasin family protein. (186 aa)    
Predicted Functional Partners:
SIR47057.1
Hypothetical protein.
  
     0.774
SIQ63248.1
Phasin family protein.
  
     0.773
SIR61507.1
PAS/PAC sensor signal transduction histidine kinase.
  
     0.755
SIQ31384.1
Uncharacterized membrane protein.
  
     0.737
SIR49407.1
VanZ like family protein.
  
     0.720
SIQ27055.1
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.717
SIQ93462.1
Phenylpropionate dioxygenase, large terminal subunit.
  
     0.694
SIQ71601.1
PAS/PAC sensor signal transduction histidine kinase.
  
     0.684
SIQ23169.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.661
SIQ29183.1
Protein of unknown function.
  
     0.623
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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