STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR55836.1Peptidyl-prolyl cis-trans isomerase C. (239 aa)    
Predicted Functional Partners:
SIR55852.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.911
SIR55912.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
     0.858
SIR55928.1
Hypothetical protein.
 
   0.847
SIR55875.1
Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family.
 
 
   0.828
SIR55893.1
Protein SCO1/2.
 
 
   0.828
SIR56072.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 
 
 0.646
SIQ68019.1
TniQ protein.
  
     0.622
SIQ10819.1
Hypothetical protein.
  
  
 0.603
SIQ26154.1
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.592
SIQ26183.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.592
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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