Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR60686.1 | SIR60725.1 | SAMN05421829_1238 | SAMN05421829_12310 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook protein FlgE. | 0.999 |
SIR60686.1 | SIR60856.1 | SAMN05421829_1238 | SAMN05421829_12317 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 3 FlgL. | 0.986 |
SIR60686.1 | SIR61057.1 | SAMN05421829_1238 | SAMN05421829_12328 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellum-specific ATP synthase. | 0.986 |
SIR60686.1 | SIR61123.1 | SAMN05421829_1238 | SAMN05421829_12331 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.999 |
SIR60686.1 | SIR61274.1 | SAMN05421829_1238 | SAMN05421829_12339 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar protein FliS. | 0.985 |
SIR60686.1 | SIR61290.1 | SAMN05421829_1238 | SAMN05421829_12340 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.985 |
SIR60686.1 | SIR61329.1 | SAMN05421829_1238 | SAMN05421829_12341 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar protein FlaG. | 0.673 |
SIR60686.1 | SIR61344.1 | SAMN05421829_1238 | SAMN05421829_12342 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.974 |
SIR60686.1 | flgK | SAMN05421829_1238 | SAMN05421829_12316 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 1 FlgK. | 0.991 |
SIR60725.1 | SIR60686.1 | SAMN05421829_12310 | SAMN05421829_1238 | Flagellar hook protein FlgE. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.999 |
SIR60725.1 | SIR60856.1 | SAMN05421829_12310 | SAMN05421829_12317 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 3 FlgL. | 0.988 |
SIR60725.1 | SIR61057.1 | SAMN05421829_12310 | SAMN05421829_12328 | Flagellar hook protein FlgE. | Flagellum-specific ATP synthase. | 0.974 |
SIR60725.1 | SIR61123.1 | SAMN05421829_12310 | SAMN05421829_12331 | Flagellar hook protein FlgE. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.997 |
SIR60725.1 | SIR61274.1 | SAMN05421829_12310 | SAMN05421829_12339 | Flagellar hook protein FlgE. | Flagellar protein FliS. | 0.974 |
SIR60725.1 | SIR61290.1 | SAMN05421829_12310 | SAMN05421829_12340 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.984 |
SIR60725.1 | SIR61344.1 | SAMN05421829_12310 | SAMN05421829_12342 | Flagellar hook protein FlgE. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.974 |
SIR60725.1 | flgK | SAMN05421829_12310 | SAMN05421829_12316 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 1 FlgK. | 0.991 |
SIR60856.1 | SIR60686.1 | SAMN05421829_12317 | SAMN05421829_1238 | Flagellar hook-associated protein 3 FlgL. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.986 |
SIR60856.1 | SIR60725.1 | SAMN05421829_12317 | SAMN05421829_12310 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook protein FlgE. | 0.988 |
SIR60856.1 | SIR61057.1 | SAMN05421829_12317 | SAMN05421829_12328 | Flagellar hook-associated protein 3 FlgL. | Flagellum-specific ATP synthase. | 0.970 |
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