STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR63021.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
SIQ68239.1
Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.804
SIR16462.1
Iron complex outermembrane recepter protein.
    
 
 0.804
SIR49988.1
Iron complex outermembrane recepter protein.
    
 
 0.804
SIR63035.1
Diguanylate cyclase/phosphodiesterase.
       0.773
SIQ41229.1
Lysophospholipase L1.
  
 
 0.560
SIR63006.1
Hypothetical protein.
       0.554
SIP88503.1
Cell division and transport-associated protein TolA.
  
 
 0.505
SIQ92022.1
Hypothetical protein.
  
 
 0.505
SIR65391.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
 0.505
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.