STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR63911.1Fusaric acid resistance protein-like. (364 aa)    
Predicted Functional Partners:
SIQ46650.1
Nitrogen fixation protein NifQ.
  
    0.670
SIR46031.1
Nitrogen fixation protein NifQ.
  
    0.665
SIQ04017.1
Nitrogen fixation protein NifU.
   
    0.616
SIR45846.1
FeS assembly scaffold apoprotein IscU /Modular FeS cluster scaffolding protein NifU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.616
SIR51937.1
FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.616
SIR52581.1
Fe-S cluster assembly protein SufU.
   
    0.616
SIR16284.1
Rubrerythrin.
 
    0.600
SIR62330.1
Aspartate racemase.
   
    0.577
SIP92970.1
HlyD family secretion protein.
  
 
 0.554
SIR22559.1
Membrane fusion protein, adhesin transport system.
  
 
 0.554
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.