STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR66655.1Hypothetical protein. (807 aa)    
Predicted Functional Partners:
SIR66674.1
Photosynthesis system II assembly factor YCF48.
 
  
 0.948
SIR66635.1
Protein of unknown function.
 
   
 0.904
SIR66616.1
Protein of unknown function.
 
  
 0.893
SIQ03427.1
Uncharacterized protein.
 
  
 0.827
SIR08827.1
Uncharacterized protein.
 
  
 0.823
SIQ24125.1
Uncharacterized protein.
 
  
 0.822
SIQ10012.1
Uncharacterized protein.
 
  
 0.821
SIR58975.1
Uncharacterized protein.
 
  
 0.821
SIR20371.1
Photosynthesis system II assembly factor YCF48.
 
  
 0.820
SIQ03501.1
Protein of unknown function.
 
  
 0.786
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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