STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR66848.1Hypothetical protein. (780 aa)    
Predicted Functional Partners:
SIR66867.1
Type VI secretion system secreted protein VgrG.
     
 0.801
SIQ10795.1
Hypothetical protein.
  
    0.630
SIR54144.1
Hypothetical protein.
  
    0.609
SIQ96565.1
Tape measure domain-containing protein.
  
    0.571
SIR54200.1
Phage protein D.
  
  
 0.565
SIR16672.1
Chitosanase.
     
 0.537
SIR54099.1
Phage tail protein domain-containing protein.
  
    0.513
SIR54312.1
Hypothetical protein.
  
    0.501
Your Current Organism:
Aromatoleum tolulyticum
NCBI taxonomy Id: 34027
Other names: A. tolulyticum, ATCC 51758, Azoarcus denitrificans, Azoarcus tolulyticus, CIP 109470, strain Tol-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.