STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS60956.1Homogentisate 1,2-dioxygenase. (394 aa)    
Predicted Functional Partners:
AOS61636.1
4-hydroxyphenylpyruvate dioxygenase.
 
 0.997
AOS60958.1
Fumarylacetoacetate hydrolase.
 
  
 0.979
AOS60957.1
Hypothetical protein.
 
     0.810
AOS62310.1
methylmalonyl-CoA epimerase.
  
 
 0.747
AOS64626.1
Putative DUF1446 family protein.
  
 
 0.740
AOS62796.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
  
  
 0.637
AOS65317.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
  
  
 0.637
AOS61704.1
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.563
AOS60955.1
Hypothetical protein.
 
     0.531
AOS64560.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
 
  
 0.495
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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