Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOS61477.1 | AOS61479.1 | TL08_03220 | TL08_03230 | Signal transduction histidine kinase. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.582 |
| AOS61477.1 | AOS61480.1 | TL08_03220 | TL08_03235 | Signal transduction histidine kinase. | Molybdenum cofactor synthesis domain. | 0.492 |
| AOS61479.1 | AOS61477.1 | TL08_03230 | TL08_03220 | Trypsin-like serine protease with C-terminal PDZ domain. | Signal transduction histidine kinase. | 0.582 |
| AOS61479.1 | AOS61480.1 | TL08_03230 | TL08_03235 | Trypsin-like serine protease with C-terminal PDZ domain. | Molybdenum cofactor synthesis domain. | 0.817 |
| AOS61479.1 | AOS62122.1 | TL08_03230 | TL08_06490 | Trypsin-like serine protease with C-terminal PDZ domain. | Putative metal-dependent protease of the. | 0.495 |
| AOS61479.1 | arc | TL08_03230 | TL08_12040 | Trypsin-like serine protease with C-terminal PDZ domain. | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.765 |
| AOS61479.1 | clpP | TL08_03230 | TL08_08050 | Trypsin-like serine protease with C-terminal PDZ domain. | Protease subunit of ATP-dependent protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.565 |
| AOS61479.1 | clpP-2 | TL08_03230 | TL08_08055 | Trypsin-like serine protease with C-terminal PDZ domain. | Protease subunit of ATP-dependent protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.590 |
| AOS61479.1 | clpP-3 | TL08_03230 | TL08_15425 | Trypsin-like serine protease with C-terminal PDZ domain. | Protease subunit of ATP-dependent protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.569 |
| AOS61479.1 | glpK | TL08_03230 | TL08_23785 | Trypsin-like serine protease with C-terminal PDZ domain. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.580 |
| AOS61479.1 | hflX | TL08_03230 | TL08_08570 | Trypsin-like serine protease with C-terminal PDZ domain. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.494 |
| AOS61479.1 | pnp | TL08_03230 | TL08_09290 | Trypsin-like serine protease with C-terminal PDZ domain. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.555 |
| AOS61480.1 | AOS61477.1 | TL08_03235 | TL08_03220 | Molybdenum cofactor synthesis domain. | Signal transduction histidine kinase. | 0.492 |
| AOS61480.1 | AOS61479.1 | TL08_03235 | TL08_03230 | Molybdenum cofactor synthesis domain. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.817 |
| AOS62122.1 | AOS61479.1 | TL08_06490 | TL08_03230 | Putative metal-dependent protease of the. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.495 |
| AOS62122.1 | arc | TL08_06490 | TL08_12040 | Putative metal-dependent protease of the. | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.984 |
| AOS62122.1 | glpK | TL08_06490 | TL08_23785 | Putative metal-dependent protease of the. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.976 |
| arc | AOS61479.1 | TL08_12040 | TL08_03230 | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.765 |
| arc | AOS62122.1 | TL08_12040 | TL08_06490 | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Putative metal-dependent protease of the. | 0.984 |
| arc | glpK | TL08_12040 | TL08_23785 | Proteasome ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.978 |
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