STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS61491.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (406 aa)    
Predicted Functional Partners:
AOS61493.1
Hypothetical protein.
 
    0.843
AOS61492.1
DNA-binding protein, excisionase family.
     
 0.792
AOS61497.1
FtsK/SpoIIIE family protein.
 
     0.597
AOS61494.1
Hypothetical protein.
       0.532
AOS61495.1
Hypothetical protein.
       0.517
AOS61496.1
Hypothetical protein.
       0.517
AOS62456.1
ATP-dependent DNA helicase, RecQ family.
 
  
 0.430
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.418
AOS65000.1
Bifunctional DNA primase/polymerase famiily protein.
 
     0.412
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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