Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOS61496.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
AOS61494.1
Hypothetical protein.
       0.773
AOS61495.1
Hypothetical protein.
       0.773
AOS61497.1
FtsK/SpoIIIE family protein.
       0.773
AOS61498.1
Hypothetical protein.
       0.542
AOS61499.1
Hypothetical protein.
       0.542
AOS61491.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.517
AOS61492.1
DNA-binding protein, excisionase family.
       0.517
AOS61493.1
Hypothetical protein.
       0.517
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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