STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS61514.1DNA-binding domain-containing protein, AraC-type. (132 aa)    
Predicted Functional Partners:
AOS61513.1
Lactoylglutathione lyase-like lyase.
 
     0.947
AOS64540.1
Lactoylglutathione lyase-like lyase.
 
     0.694
AOS64246.1
Lactoylglutathione lyase-like lyase.
 
     0.672
AOS61512.1
Putative lactoylglutathione lyase.
  
    0.618
AOS63213.1
DNA-binding domain-containing protein, AraC-type.
  
     0.548
AOS63663.1
AraC family transcriptional regulator.
 
 
 0.532
AOS64511.1
DNA-binding domain-containing protein, AraC-type.
  
     0.494
AOS61515.1
Transcriptional regulator, TetR family.
       0.489
AOS61399.1
DNA-binding domain-containing protein, AraC-type.
  
     0.453
AOS64556.1
DNA binding protein with helix-turn-helix domain.
  
     0.412
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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