Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AOS61638.1Phosphotransferase family protein. (315 aa)    
Predicted Functional Partners:
AOS65600.1
DNA binding protein with helix-turn-helix domain.
  
     0.531
AOS64103.1
Acetyltransferase (GNAT) family protein.
  
     0.484
AOS63406.1
DNA binding protein with helix-turn-helix domain.
  
     0.483
greA
Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.466
AOS64368.1
Putative DUF4429 family protein/Short C-terminal domain.
  
     0.460
AOS63495.1
Putative transcriptional regulator.
  
     0.449
AOS61455.1
Putative DUF1707 family protein.
  
     0.447
AOS62937.1
Transcriptional regulator, TetR family.
  
     0.441
AOS62803.1
Hypothetical protein.
  
     0.425
AOS63147.1
Ketosteroid isomerase-like protein.
  
     0.404
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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