STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS61783.1tRNA-(MS(2)IO(6)A)-hydroxylase (MiaE). (228 aa)    
Predicted Functional Partners:
AOS61351.1
phenylacetate-CoA oxygenase, PaaH subunit.
  
 
 0.670
AOS61784.1
Putative DUF3107 family protein.
       0.607
AOS61354.1
Flavodoxin reductase family protein.
  
 
 0.574
AOS61780.1
Lysophospholipase.
 
    0.526
AOS61086.1
Oxyanion-translocating ATPase.
  
     0.513
AOS61781.1
Hypothetical protein.
       0.511
AOS60993.1
Putative DUF2587 family protein.
  
     0.479
AOS61782.1
DNA/RNA helicase, superfamily II; Belongs to the DEAD box helicase family.
       0.459
AOS65957.1
Putative DUF1416 family protein.
  
     0.444
AOS65953.1
Putative DUF2993 family protein.
  
     0.432
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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