STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS62623.1Two component transcriptional regulator, LuxR family. (224 aa)    
Predicted Functional Partners:
AOS62622.1
Histidine kinase.
 
   0.943
AOS63166.1
Signal transduction histidine kinase.
  
   0.791
AOS61529.1
Signal transduction histidine kinase.
   0.779
AOS65592.1
Histidine kinase.
  
   0.779
AOS64830.1
Signal transduction histidine kinase.
 
   0.777
AOS62621.1
Hypothetical protein.
       0.773
AOS66019.1
Signal transduction histidine kinase.
  
   0.756
AOS64398.1
Signal transduction histidine kinase.
  
   0.724
AOS64584.1
Signal transduction histidine kinase.
 
   0.692
AOS60963.1
Histidine kinase.
 
 
 0.691
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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