Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOS61908.1 | AOS63048.1 | TL08_05405 | TL08_11170 | Beta-1,4-xylanase. | Hypothetical protein. | 0.567 |
AOS61908.1 | AOS63494.1 | TL08_05405 | TL08_13400 | Beta-1,4-xylanase. | Glycosyl hydrolase family 65, N-terminal domain. | 0.635 |
AOS61908.1 | AOS63551.1 | TL08_05405 | TL08_13685 | Beta-1,4-xylanase. | Glycosyl hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. | 0.693 |
AOS61908.1 | AOS63797.1 | TL08_05405 | TL08_14940 | Beta-1,4-xylanase. | Hypothetical protein. | 0.551 |
AOS61908.1 | AOS64274.1 | TL08_05405 | TL08_17370 | Beta-1,4-xylanase. | Putative beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.410 |
AOS61908.1 | AOS64562.1 | TL08_05405 | TL08_18855 | Beta-1,4-xylanase. | Pectate lyase. | 0.688 |
AOS61908.1 | AOS64809.1 | TL08_05405 | TL08_20090 | Beta-1,4-xylanase. | Hypothetical protein; Pectinolytic enzyme that degrades type I rhamnogalacturonan from plant cell walls and releases oligosaccharide products. Degrades rhamnogalacturonan, polygalacturonic acid, pectic acid and pectin. | 0.624 |
AOS61908.1 | AOS64931.1 | TL08_05405 | TL08_20700 | Beta-1,4-xylanase. | Glycosyl hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. | 0.567 |
AOS63048.1 | AOS61908.1 | TL08_11170 | TL08_05405 | Hypothetical protein. | Beta-1,4-xylanase. | 0.567 |
AOS63048.1 | AOS63494.1 | TL08_11170 | TL08_13400 | Hypothetical protein. | Glycosyl hydrolase family 65, N-terminal domain. | 0.567 |
AOS63048.1 | AOS63550.1 | TL08_11170 | TL08_13680 | Hypothetical protein. | Hypothetical protein. | 0.646 |
AOS63048.1 | AOS63551.1 | TL08_11170 | TL08_13685 | Hypothetical protein. | Glycosyl hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. | 0.742 |
AOS63048.1 | AOS64274.1 | TL08_11170 | TL08_17370 | Hypothetical protein. | Putative beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.510 |
AOS63048.1 | AOS64276.1 | TL08_11170 | TL08_17380 | Hypothetical protein. | Hypothetical protein. | 0.580 |
AOS63048.1 | AOS64562.1 | TL08_11170 | TL08_18855 | Hypothetical protein. | Pectate lyase. | 0.688 |
AOS63048.1 | AOS64931.1 | TL08_11170 | TL08_20700 | Hypothetical protein. | Glycosyl hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. | 0.728 |
AOS63494.1 | AOS61908.1 | TL08_13400 | TL08_05405 | Glycosyl hydrolase family 65, N-terminal domain. | Beta-1,4-xylanase. | 0.635 |
AOS63494.1 | AOS63048.1 | TL08_13400 | TL08_11170 | Glycosyl hydrolase family 65, N-terminal domain. | Hypothetical protein. | 0.567 |
AOS63494.1 | AOS63551.1 | TL08_13400 | TL08_13685 | Glycosyl hydrolase family 65, N-terminal domain. | Glycosyl hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. | 0.743 |
AOS63494.1 | AOS63797.1 | TL08_13400 | TL08_14940 | Glycosyl hydrolase family 65, N-terminal domain. | Hypothetical protein. | 0.443 |
page 1 of 5