STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS64803.1CRISPR type I-E/ECOLI-associated protein CasB/Cse2. (211 aa)    
Predicted Functional Partners:
AOS64802.1
CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI.
 
 
 0.991
AOS64804.1
CRISPR type I-E/ECOLI-associated protein CasA/Cse1.
 
 
 0.989
AOS64800.1
CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI.
 
 
 0.988
AOS64819.1
CRISPR-associated protein Cas5.
 
 
 0.967
AOS64801.1
CRISPR-associated protein Cas5.
 
     0.955
AOS64818.1
CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI.
 
 
 0.939
AOS64820.1
CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI.
 
 
 0.925
AOS64806.1
CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD.
 
  
 0.889
AOS64816.1
CRISPR type I-E/ECOLI-associated protein CasA/Cse1.
 
 
 0.885
AOS64817.1
CRISPR type I-E/ECOLI-associated protein CasB/Cse2.
  
 
 0.864
Your Current Organism:
Actinoalloteichus hymeniacidonis
NCBI taxonomy Id: 340345
Other names: A. hymeniacidonis, Actinoalloteichus hymeniacidonis Zhang et al. 2006 emend. Nouioui et al. 2018, Actinomycetales bacterium HPA177, CGMCC 4.2500, DSM 45092, JCM 13436, strain HPA177
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