STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX76599.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)    
Predicted Functional Partners:
OBX76617.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
OBX76243.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.635
OBX76613.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
OBX76598.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.406
Your Current Organism:
Moraxella atlantae
NCBI taxonomy Id: 34059
Other names: ATCC 29525, CCUG 6415, CIP 82.25, DSM 6999, IFO 14588, LMG 5133, LMG:5133, M. atlantae, Moraxella atlantensis, NBRC 14588, NCTC 11091, strain 5118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.