STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOR92842.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)    
Predicted Functional Partners:
OOR87117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OOR92831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OOR91904.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.704
vapB
Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.704
hsdR
Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.534
vapC
VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.495
Your Current Organism:
Moraxella caviae
NCBI taxonomy Id: 34060
Other names: ATCC 14659, CCUG 2132, CCUG 355, M. caviae, NCTC 10293, Neisseria caviae, strain GP 11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.