Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOR88179.1 | OOR91041.1 | B0181_08820 | B0181_03655 | IS1595 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
OOR89884.1 | OOR91041.1 | B0181_05585 | B0181_03655 | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
OOR91041.1 | OOR88179.1 | B0181_03655 | B0181_08820 | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | IS1595 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
OOR91041.1 | OOR89884.1 | B0181_03655 | B0181_05585 | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
OOR91041.1 | gcp | B0181_03655 | B0181_03660 | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.421 |
gcp | OOR91041.1 | B0181_03660 | B0181_03655 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | DDE transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |