STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmoMSAM-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. (272 aa)    
Predicted Functional Partners:
PrpE
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.720
cmoB
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
 
   
 0.720
cmoA
carboxy-S-adenosyl-L-methionine synthase CmoA; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
 
  
 0.713
OOS03677.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.515
OOS07946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
mnmC
Transposase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.
  
 
 
 0.472
OOS07943.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
DltB
Membrane-bound O-acyltransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family.
       0.442
OOS07942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.434
BarA
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.419
Your Current Organism:
Moraxella cuniculi
NCBI taxonomy Id: 34061
Other names: ATCC 14688, CCUG 2154, DSM 21768, LMG 8382, LMG:8382, M. cuniculi, NCTC 10297, Neisseria cuniculi, strain K 19
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