Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AME00693.1 | AME00694.1 | AXE82_01985 | AXE82_01990 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.622 |
| AME00693.1 | AME00695.1 | AXE82_01985 | AXE82_01995 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
| AME00693.1 | metZ | AXE82_01985 | AXE82_03140 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.431 |
| AME00693.1 | recR | AXE82_01985 | AXE82_03125 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.462 |
| AME00693.1 | rpoB | AXE82_01985 | AXE82_09580 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.405 |
| AME00693.1 | rpoC | AXE82_01985 | AXE82_09585 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.444 |
| AME00693.1 | rpoZ | AXE82_01985 | AXE82_10175 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.427 |
| AME00694.1 | AME00693.1 | AXE82_01990 | AXE82_01985 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
| AME00694.1 | AME00695.1 | AXE82_01990 | AXE82_01995 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.711 |
| AME00695.1 | AME00693.1 | AXE82_01995 | AXE82_01985 | Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
| AME00695.1 | AME00694.1 | AXE82_01995 | AXE82_01990 | Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.711 |
| metZ | AME00693.1 | AXE82_03140 | AXE82_01985 | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
| recR | AME00693.1 | AXE82_03125 | AXE82_01985 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
| rpoB | AME00693.1 | AXE82_09580 | AXE82_01985 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.405 |
| rpoB | rpoC | AXE82_09580 | AXE82_09585 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoZ | AXE82_09580 | AXE82_10175 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.998 |
| rpoC | AME00693.1 | AXE82_09585 | AXE82_01985 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| rpoC | rpoB | AXE82_09585 | AXE82_09580 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoC | rpoZ | AXE82_09585 | AXE82_10175 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.996 |
| rpoZ | AME00693.1 | AXE82_10175 | AXE82_01985 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
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