Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AME00865.1Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
AME01983.1
Pilus assembly protein PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
AME00445.1
Tryptophan repressor-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.
   
  
 0.625
yjbJ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
    0.483
AME02235.1
DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
    0.453
AME01981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.443
AME01979.1
Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.442
AME01980.1
Pilus assembly protein PilS; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.442
otsB
Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.419
AME00612.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.410
AME01559.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.410
Your Current Organism:
Moraxella osloensis
NCBI taxonomy Id: 34062
Other names: ATCC 19976, CCUG 350, CIP 68.35, DSM 6998, LMG 5131, LMG:5131, M. osloensis, NCTC 10465, strain A1920
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