Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AME01808.1 | AME01810.1 | AXE82_08605 | AXE82_08615 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.474 |
| AME01808.1 | aroE | AXE82_08605 | AXE82_08610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.773 |
| AME01810.1 | AME01808.1 | AXE82_08615 | AXE82_08605 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.474 |
| AME01810.1 | AME01811.1 | AXE82_08615 | AXE82_08620 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.596 |
| AME01810.1 | aroE | AXE82_08615 | AXE82_08610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.474 |
| AME01810.1 | mltG | AXE82_08615 | AXE82_08625 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.426 |
| AME01810.1 | tmk | AXE82_08615 | AXE82_08630 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.414 |
| AME01811.1 | AME01810.1 | AXE82_08620 | AXE82_08615 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.596 |
| AME01811.1 | aroE | AXE82_08620 | AXE82_08610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.427 |
| AME01811.1 | mltG | AXE82_08620 | AXE82_08625 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.751 |
| AME01811.1 | tmk | AXE82_08620 | AXE82_08630 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.754 |
| aroE | AME01808.1 | AXE82_08610 | AXE82_08605 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.773 |
| aroE | AME01810.1 | AXE82_08610 | AXE82_08615 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.474 |
| aroE | AME01811.1 | AXE82_08610 | AXE82_08620 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.427 |
| aroE | mltG | AXE82_08610 | AXE82_08625 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.583 |
| mltG | AME01810.1 | AXE82_08625 | AXE82_08615 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.426 |
| mltG | AME01811.1 | AXE82_08625 | AXE82_08620 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.751 |
| mltG | aroE | AXE82_08625 | AXE82_08610 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.583 |
| mltG | tmk | AXE82_08625 | AXE82_08630 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.857 |
| tmk | AME01810.1 | AXE82_08630 | AXE82_08615 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.414 |
page 1 of 2